Projects/Software Developed
AGILE:
AliGnIng Long rEads. A Fast and Accurate Sequence Mapping Tool for Long Reads
PairwiseStatSig_DDP: A Program for Estimating
Pairwise Statistical Significance of Protein Local Sequence Alignment using
Derived Distribution Points (DDP) heuristic
MPIPairwiseStatSig: An MPI C Program for Estimating
Pairwise Statistical Significance of Protein Local Sequence Alignment
NCPairwiseStatSig: A Program for Estimating
Non-Conservative Pairwise Statistical Significance of Protein Local Sequence
Alignment
PSIBLAST_PairwiseStatSig:
Reordering PSI-BLAST Hits Using Pairwise Statistical Significance
PairwiseStatSig_PSSM: A Program for Estimating
Pairwise Statistical Significance of Protein Local Sequence Alignment using
position-specific substitution matrices
PairwiseStatSig_SSSM: A Program for Estimating
Pairwise Statistical Significance of Protein Local Sequence Alignment using
sequence-specific substitution matrices
PairwiseStatSig: A Program for Estimating
Pairwise Statistical Significance of Protein Local Sequence Alignment (using
standard substitution matrices)
DNAlignTT: Pairwise DNA Alignment with
Sequence Specific Transition-Transversion Ratio
FATBEP: Fuzzy-Adaptive-Thresholding-Based
Exon Predictor
(based on B. Tech. project at
IIT Roorkee - awarded the best B. Tech. project in Computer Science)
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